Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 MTHFR-210ENST00000641407 2387 ntBASIC17.57■□□□□ 0.4
CDKL5O76039 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDKL5O76039 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL5O76039 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CDKL5O76039 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CDKL5O76039 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 AP006294.1-201ENST00000415407 339 ntBASIC17.57■□□□□ 0.4
CDKL5O76039 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.57■□□□□ 0.4
CDKL5O76039 EIF3FP3-201ENST00000434851 1086 ntBASIC17.57■□□□□ 0.4
CDKL5O76039 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.57■□□□□ 0.4
CDKL5O76039 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 AC093433.1-201ENST00000458048 571 ntBASIC17.57■□□□□ 0.4
CDKL5O76039 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKL5O76039 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKL5O76039 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.57■□□□□ 0.4
CDKL5O76039 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKL5O76039 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKL5O76039 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKL5O76039 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 LINC00552-201ENST00000625151 2579 ntBASIC17.56■□□□□ 0.4
CDKL5O76039 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL5O76039 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 AC098614.1-201ENST00000368528 745 ntBASIC17.56■□□□□ 0.4
CDKL5O76039 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 AC026434.2-201ENST00000506094 1078 ntBASIC17.56■□□□□ 0.4
CDKL5O76039 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKL5O76039 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKL5O76039 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL5O76039 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL5O76039 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL5O76039 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL5O76039 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDKL5O76039 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKL5O76039 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDKL5O76039 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKL5O76039 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKL5O76039 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDKL5O76039 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms