Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 AC011498.7-201ENST00000624986 2027 ntBASIC13.17□□□□□ -0.3
UPK1BO75841 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 RNF152P1-201ENST00000397754 604 ntBASIC13.17□□□□□ -0.3
UPK1BO75841 AC104457.1-201ENST00000401024 814 ntBASIC13.17□□□□□ -0.3
UPK1BO75841 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 CD99P1-205ENST00000527459 561 ntBASIC13.17□□□□□ -0.3
UPK1BO75841 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.17□□□□□ -0.3
UPK1BO75841 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK1BO75841 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK1BO75841 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 AL445209.1-201ENST00000607269 3491 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 FAM201B-201ENST00000458407 597 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 RPS15P9-201ENST00000494093 319 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK1BO75841 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK1BO75841 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK1BO75841 MIR5100-201ENST00000579544 119 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 AC024267.1-201ENST00000582320 895 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK1BO75841 ACTL9-202ENST00000612068 1252 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK1BO75841 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 RN7SL832P-201ENST00000607781 1756 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UPK1BO75841 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UPK1BO75841 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK1BO75841 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 BX324167.2-201ENST00000623717 3316 ntBASIC13.16□□□□□ -0.3
UPK1BO75841 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK1BO75841 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK1BO75841 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK1BO75841 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK1BO75841 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK1BO75841 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK1BO75841 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms