Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NDUFS3O75489 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 AL390755.1-201ENST00000623716 2027 ntBASIC15.11■□□□□ 0.01
NDUFS3O75489 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS3O75489 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NDUFS3O75489 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NDUFS3O75489 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NDUFS3O75489 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS3O75489 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.11■□□□□ 0.01
NDUFS3O75489 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.11■□□□□ 0.01
NDUFS3O75489 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NDUFS3O75489 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 TERF1P3-201ENST00000505638 1227 ntBASIC15.11■□□□□ 0.01
NDUFS3O75489 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS3O75489 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.11■□□□□ 0.01
NDUFS3O75489 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFS3O75489 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NDUFS3O75489 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS3O75489 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.11■□□□□ 0.01
NDUFS3O75489 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFS3O75489 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFS3O75489 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 AL139094.1-201ENST00000405549 1188 ntBASIC15.1■□□□□ 0.01
NDUFS3O75489 ELK1P1-201ENST00000485699 580 ntBASIC15.1■□□□□ 0.01
NDUFS3O75489 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.1■□□□□ 0.01
NDUFS3O75489 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NDUFS3O75489 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.1■□□□□ 0.01
NDUFS3O75489 AC140912.1-201ENST00000577171 1054 ntBASIC15.1■□□□□ 0.01
NDUFS3O75489 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.1■□□□□ 0.01
NDUFS3O75489 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NDUFS3O75489 PRSS30P-206ENST00000641773 873 ntBASIC15.1■□□□□ 0.01
NDUFS3O75489 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 AC007292.2-201ENST00000593524 1812 ntBASIC15.1■□□□□ 0.01
NDUFS3O75489 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFS3O75489 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFS3O75489 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFS3O75489 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms