Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ZNF253O75346 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 UXT-AS1-201ENST00000590504 1525 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.87□□□□□ -0.51
ZNF253O75346 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 AL590627.1-203ENST00000421194 1026 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 MCCD1P2-201ENST00000423228 335 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 MKNK2P1-201ENST00000437526 628 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 KRT8P48-201ENST00000515599 1220 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 AC040169.1-201ENST00000565382 521 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 AL645728.2-202ENST00000641679 227 ntBASIC11.87□□□□□ -0.51
ZNF253O75346 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.87□□□□□ -0.51
ZNF253O75346 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.87□□□□□ -0.51
ZNF253O75346 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZNF253O75346 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 AL023775.1-201ENST00000454907 1746 ntBASIC11.86□□□□□ -0.51
ZNF253O75346 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 STRCP1-201ENST00000509801 5328 ntBASIC11.86□□□□□ -0.51
ZNF253O75346 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ZNF253O75346 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ZNF253O75346 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 YBX2P1-201ENST00000394192 760 ntBASIC11.86□□□□□ -0.51
ZNF253O75346 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 SLC25A39P2-201ENST00000537614 270 ntBASIC11.86□□□□□ -0.51
ZNF253O75346 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.86□□□□□ -0.51
ZNF253O75346 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms