Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AL360270.3-201ENST00000609118 1348 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AC099336.1-201ENST00000417053 1171 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 FAM21FP-201ENST00000426241 1131 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 CSF2RBP1-201ENST00000447905 391 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AP000812.2-201ENST00000538934 718 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 TNRC18P2-201ENST00000417666 2714 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.23□□□□□ -0.13
PRAMEF2O60811 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRAMEF2O60811 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.23□□□□□ -0.13
PRAMEF2O60811 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 FTH1P14-201ENST00000482930 551 ntBASIC14.22□□□□□ -0.13
PRAMEF2O60811 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 REXO1L2P-201ENST00000425429 2069 ntBASIC14.22□□□□□ -0.13
PRAMEF2O60811 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF2O60811 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF2O60811 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms