Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AL390755.1-201ENST00000623716 2027 ntBASIC13.2□□□□□ -0.3
XRCC2O43543 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 AC087499.6-201ENST00000411576 835 ntBASIC13.2□□□□□ -0.3
XRCC2O43543 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 GNAQP1-201ENST00000444815 1067 ntBASIC13.2□□□□□ -0.3
XRCC2O43543 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.2□□□□□ -0.3
XRCC2O43543 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.2□□□□□ -0.3
XRCC2O43543 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.2□□□□□ -0.3
XRCC2O43543 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.2□□□□□ -0.3
XRCC2O43543 AC120045.2-201ENST00000567334 178 ntBASIC13.2□□□□□ -0.3
XRCC2O43543 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
XRCC2O43543 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 AL158070.2-201ENST00000623713 1621 ntBASIC13.2□□□□□ -0.3
XRCC2O43543 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
XRCC2O43543 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
XRCC2O43543 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
XRCC2O43543 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
XRCC2O43543 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 AC117489.1-201ENST00000625169 3217 ntBASIC13.19□□□□□ -0.3
XRCC2O43543 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 FAM207CP-201ENST00000443486 507 ntBASIC13.19□□□□□ -0.3
XRCC2O43543 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.19□□□□□ -0.3
XRCC2O43543 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.19□□□□□ -0.3
XRCC2O43543 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.19□□□□□ -0.3
XRCC2O43543 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.19□□□□□ -0.3
XRCC2O43543 BX539320.1-201ENST00000623759 877 ntBASIC13.19□□□□□ -0.3
XRCC2O43543 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.19□□□□□ -0.3
XRCC2O43543 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.19□□□□□ -0.3
XRCC2O43543 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
XRCC2O43543 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms