Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSI1O43347 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
MSI1O43347 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSI1O43347 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.68■□□□□ 0.1
MSI1O43347 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.68■□□□□ 0.1
MSI1O43347 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSI1O43347 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MSI1O43347 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.68■□□□□ 0.1
MSI1O43347 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.67■□□□□ 0.1
MSI1O43347 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.67■□□□□ 0.1
MSI1O43347 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.67■□□□□ 0.1
MSI1O43347 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
MSI1O43347 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.67■□□□□ 0.1
MSI1O43347 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.67■□□□□ 0.1
MSI1O43347 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.67■□□□□ 0.1
MSI1O43347 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.67■□□□□ 0.1
MSI1O43347 AL391280.1-201ENST00000506969 1062 ntBASIC15.67■□□□□ 0.1
MSI1O43347 AC079316.1-201ENST00000548397 411 ntBASIC15.67■□□□□ 0.1
MSI1O43347 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.67■□□□□ 0.1
MSI1O43347 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 AC138466.3-201ENST00000619983 221 ntBASIC15.67■□□□□ 0.1
MSI1O43347 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 INE2-201ENST00000630399 1874 ntBASIC15.67■□□□□ 0.1
MSI1O43347 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MSI1O43347 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MSI1O43347 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 FAM8A4P-201ENST00000435433 1213 ntBASIC15.66■□□□□ 0.1
MSI1O43347 YBX1P6-201ENST00000442962 1002 ntBASIC15.66■□□□□ 0.1
MSI1O43347 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.66■□□□□ 0.1
MSI1O43347 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.66■□□□□ 0.1
MSI1O43347 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.66■□□□□ 0.1
MSI1O43347 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.66■□□□□ 0.1
MSI1O43347 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
MSI1O43347 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.66■□□□□ 0.1
MSI1O43347 AJ011931.1-201ENST00000618749 2492 ntBASIC15.66■□□□□ 0.1
MSI1O43347 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MSI1O43347 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MSI1O43347 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.65■□□□□ 0.1
MSI1O43347 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
MSI1O43347 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MSI1O43347 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.65■□□□□ 0.1
MSI1O43347 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MSI1O43347 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MSI1O43347 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MSI1O43347 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms