Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 AC139749.1-202ENST00000617529 3139 ntBASIC13.17□□□□□ -0.3
PHF1O43189 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
PHF1O43189 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.17□□□□□ -0.3
PHF1O43189 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.17□□□□□ -0.3
PHF1O43189 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 AC099548.2-209ENST00000480264 625 ntBASIC13.17□□□□□ -0.3
PHF1O43189 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.17□□□□□ -0.3
PHF1O43189 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.17□□□□□ -0.3
PHF1O43189 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.17□□□□□ -0.3
PHF1O43189 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.17□□□□□ -0.3
PHF1O43189 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.17□□□□□ -0.3
PHF1O43189 AC015936.2-201ENST00000593177 259 ntBASIC13.17□□□□□ -0.3
PHF1O43189 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.17□□□□□ -0.3
PHF1O43189 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.17□□□□□ -0.3
PHF1O43189 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PHF1O43189 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.16□□□□□ -0.3
PHF1O43189 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PHF1O43189 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
PHF1O43189 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 AC232323.1-201ENST00000540724 2099 ntBASIC13.16□□□□□ -0.3
PHF1O43189 REXO1L5P-201ENST00000622260 2098 ntBASIC13.16□□□□□ -0.3
PHF1O43189 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.16□□□□□ -0.3
PHF1O43189 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.16□□□□□ -0.3
PHF1O43189 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 TARDBPP1-201ENST00000442013 1203 ntBASIC13.16□□□□□ -0.3
PHF1O43189 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.16□□□□□ -0.3
PHF1O43189 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PHF1O43189 PHKG1P2-201ENST00000457537 863 ntBASIC13.16□□□□□ -0.3
PHF1O43189 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 AL583810.1-201ENST00000553344 1045 ntBASIC13.16□□□□□ -0.3
PHF1O43189 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.16□□□□□ -0.3
PHF1O43189 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.16□□□□□ -0.3
PHF1O43189 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.16□□□□□ -0.3
PHF1O43189 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.16□□□□□ -0.3
PHF1O43189 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.16□□□□□ -0.3
PHF1O43189 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms