Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SOX1O00570 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX1O00570 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX1O00570 RN7SL288P-201ENST00000490496 291 ntBASIC15.77■□□□□ 0.12
SOX1O00570 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.77■□□□□ 0.12
SOX1O00570 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX1O00570 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX1O00570 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 TRMT112P3-201ENST00000580149 358 ntBASIC15.77■□□□□ 0.12
SOX1O00570 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.77■□□□□ 0.12
SOX1O00570 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 MIR6893-201ENST00000613458 69 ntBASIC15.77■□□□□ 0.12
SOX1O00570 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.77■□□□□ 0.12
SOX1O00570 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
SOX1O00570 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SOX1O00570 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SOX1O00570 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 AC078925.2-201ENST00000624013 1973 ntBASIC15.76■□□□□ 0.11
SOX1O00570 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SOX1O00570 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX1O00570 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 GGTLC4P-201ENST00000402176 664 ntBASIC15.76■□□□□ 0.11
SOX1O00570 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 AC098657.1-201ENST00000416270 1135 ntBASIC15.76■□□□□ 0.11
SOX1O00570 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX1O00570 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 BPIFB5P-201ENST00000457066 1099 ntBASIC15.76■□□□□ 0.11
SOX1O00570 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 BCRP4-201ENST00000506079 804 ntBASIC15.76■□□□□ 0.11
SOX1O00570 AC090820.1-201ENST00000519722 591 ntBASIC15.76■□□□□ 0.11
SOX1O00570 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.76■□□□□ 0.11
SOX1O00570 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 OR5BD1P-201ENST00000532527 817 ntBASIC15.76■□□□□ 0.11
SOX1O00570 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.76■□□□□ 0.11
SOX1O00570 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX1O00570 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX1O00570 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.76■□□□□ 0.11
SOX1O00570 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SOX1O00570 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.76■□□□□ 0.11
SOX1O00570 AC006449.5-201ENST00000610658 2098 ntBASIC15.75■□□□□ 0.11
SOX1O00570 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.75■□□□□ 0.11
SOX1O00570 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.75■□□□□ 0.11
SOX1O00570 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SOX1O00570 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SOX1O00570 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.75■□□□□ 0.11
SOX1O00570 AC090136.2-201ENST00000517809 420 ntBASIC15.75■□□□□ 0.11
SOX1O00570 RN7SL602P-201ENST00000578326 324 ntBASIC15.75■□□□□ 0.11
SOX1O00570 RN7SL718P-201ENST00000581254 303 ntBASIC15.75■□□□□ 0.11
SOX1O00570 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.75■□□□□ 0.11
SOX1O00570 AL160191.2-201ENST00000603975 601 ntBASIC15.75■□□□□ 0.11
SOX1O00570 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms