Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC7O00311 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC7O00311 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC7O00311 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDC7O00311 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDC7O00311 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC7O00311 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDC7O00311 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 KRT8P14-201ENST00000414254 1442 ntBASIC14.84□□□□□ -0.03
CDC7O00311 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDC7O00311 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDC7O00311 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDC7O00311 SOCS2P1-201ENST00000417727 557 ntBASIC14.84□□□□□ -0.03
CDC7O00311 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.84□□□□□ -0.03
CDC7O00311 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.84□□□□□ -0.03
CDC7O00311 BCRP1-201ENST00000444246 691 ntBASIC14.84□□□□□ -0.03
CDC7O00311 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.84□□□□□ -0.03
CDC7O00311 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 ELK1P1-201ENST00000485699 580 ntBASIC14.84□□□□□ -0.03
CDC7O00311 API5-211ENST00000534695 560 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
CDC7O00311 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.84□□□□□ -0.03
CDC7O00311 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.84□□□□□ -0.03
CDC7O00311 TMEM261P1-201ENST00000604899 340 ntBASIC14.84□□□□□ -0.03
CDC7O00311 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 AL391825.1-201ENST00000457671 1364 ntBASIC14.84□□□□□ -0.03
CDC7O00311 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC7O00311 BX640514.1-201ENST00000583223 1918 ntBASIC14.84□□□□□ -0.03
CDC7O00311 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC7O00311 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC7O00311 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.83□□□□□ -0.03
CDC7O00311 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDC7O00311 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CDC7O00311 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDC7O00311 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC7O00311 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.83□□□□□ -0.03
CDC7O00311 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDC7O00311 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.83□□□□□ -0.03
CDC7O00311 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC7O00311 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDC7O00311 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.83□□□□□ -0.03
CDC7O00311 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC7O00311 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC7O00311 AC236430.1-201ENST00000402231 743 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms