Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC097359.2-201ENST00000604992 2389 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ILF2-202ENST00000368681 726 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 KRT8P39-201ENST00000396270 1433 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ESRRAP1-201ENST00000400596 1257 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC006015.1-201ENST00000429970 570 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MTCL1P1-201ENST00000446207 792 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC097488.1-201ENST00000507834 756 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC010460.3-201ENST00000511359 1579 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AP003041.3-201ENST00000527151 707 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MIR3917-201ENST00000580971 93 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 MTDHP1-201ENST00000605323 784 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AL139246.5-201ENST00000606645 996 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC009336.1-201ENST00000608941 1553 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ANKRD20A8P-203ENST00000641373 517 ntBASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CHKB-CPT1BH3BT56 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 FRY-202ENST00000380250 10688 ntTSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 FRY-209ENST00000642040 10697 ntBASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 UBTFL8-201ENST00000426903 2112 ntBASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms