Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TBC1D3FA6NER0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 MIR4683-201ENST00000579659 81 ntBASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 AL162727.3-201ENST00000635661 2787 ntBASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TBC1D3FA6NER0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 AP000593.2-201ENST00000542775 1433 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 CICP6-201ENST00000457191 2729 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 SLC25A24P2-201ENST00000415059 510 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 AC005077.2-201ENST00000449786 690 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 EIF4HP1-201ENST00000453115 687 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 ACTG1P17-201ENST00000558391 1119 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 AL136301.1-201ENST00000615830 422 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 AC136621.1-201ENST00000624017 2304 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 C18orf15-201ENST00000623680 2534 ntBASIC15□□□□□ -0.01
TBC1D3FA6NER0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TBC1D3FA6NER0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15□□□□□ -0.01
TBC1D3FA6NER0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms