Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC007274.1-201ENST00000439805 662 ntBASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SNX18-202ENST00000343017 3140 ntBASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.22□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM14DP-201ENST00000422205 345 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TDH-203ENST00000531764 1110 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL359711.2-201ENST00000563105 872 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC008735.3-201ENST00000596646 500 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL049840.4-201ENST00000602422 811 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.21□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 C1QBPP1-201ENST00000400117 770 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms