Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.89■□□□□ 0.61
LOC102724428A0A0B4J2F2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 LYPLA2P1-203ENST00000447689 696 ntBASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 RN7SL81P-201ENST00000493781 261 ntBASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 AC114947.1-202ENST00000514136 344 ntBASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LOC102724428A0A0B4J2F2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 OR2R1P-201ENST00000441404 914 ntBASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 ORAOV1P1-201ENST00000503108 395 ntBASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 AC003686.1-201ENST00000550956 1034 ntBASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LOC102724428A0A0B4J2F2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 AHCYP4-201ENST00000419201 1315 ntBASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 HIST2H2BA-201ENST00000412169 381 ntBASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 AL157792.1-201ENST00000488281 530 ntBASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LOC102724428A0A0B4J2F2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms