Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AP000845.1-201ENST00000581677 2131 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AL645728.2-202ENST00000641679 227 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC106881.1-201ENST00000605849 3329 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 STRCP1-201ENST00000509801 5328 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 MIR770-201ENST00000390219 98 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 GNAQP1-201ENST00000444815 1067 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AC027796.2-201ENST00000575326 344 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AL049840.4-201ENST00000602422 811 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AC009118.2-201ENST00000613275 655 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 LINC01101-201ENST00000622953 1884 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AJ011931.1-201ENST00000618749 2492 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms