Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV18A0A075B6X5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AC104457.1-201ENST00000401024 814 ntBASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AL353705.2-201ENST00000428243 662 ntBASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SLC25A39P2-201ENST00000537614 270 ntBASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AC104692.2-201ENST00000603054 253 ntBASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 AC026120.1-201ENST00000611536 926 ntBASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV18A0A075B6X5 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms