Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CLCA3PQ9Y6N3 HLA-L-211ENST00000482052 1765 ntBASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 AC092028.1-203ENST00000608262 953 ntBASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCA3PQ9Y6N3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.6■■□□□ 1.05
CLCA3PQ9Y6N3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCA3PQ9Y6N3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCA3PQ9Y6N3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCA3PQ9Y6N3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 TSPY9P-201ENST00000440215 945 ntBASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 TSPY11P-201ENST00000442607 1045 ntBASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCA3PQ9Y6N3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 AL022069.1-201ENST00000568025 1636 ntBASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCA3PQ9Y6N3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCA3PQ9Y6N3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCA3PQ9Y6N3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 MTDHP2-201ENST00000601468 714 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms