Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 RARRES2P6-201ENST00000567333 442 ntBASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB7Q9Y5E2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB7Q9Y5E2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHB7Q9Y5E2 AL136967.2-201ENST00000623968 743 ntBASIC24.95■■□□□ 1.58
PCDHB7Q9Y5E2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
PCDHB7Q9Y5E2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHB7Q9Y5E2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.94■■□□□ 1.58
PCDHB7Q9Y5E2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHB7Q9Y5E2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHB7Q9Y5E2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB7Q9Y5E2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHB7Q9Y5E2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 AL022069.1-201ENST00000568025 1636 ntBASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHB7Q9Y5E2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHB7Q9Y5E2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHB7Q9Y5E2 AF213884.3-201ENST00000563833 479 ntBASIC24.92■■□□□ 1.58
PCDHB7Q9Y5E2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHB7Q9Y5E2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 MIR6089-201ENST00000616698 64 ntBASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PCDHB7Q9Y5E2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 AC105265.2-201ENST00000467189 838 ntBASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 DUSP8P4-201ENST00000399538 1761 ntBASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHB7Q9Y5E2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 MIR939-201ENST00000401314 82 ntBASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 AC099791.2-201ENST00000605725 427 ntBASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHB7Q9Y5E2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PCDHB7Q9Y5E2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 AP001330.3-201ENST00000520123 633 ntBASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 MIR4767-201ENST00000582827 78 ntBASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHB7Q9Y5E2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 SERBP1P1-201ENST00000396021 1160 ntBASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 AC026271.2-201ENST00000428091 497 ntBASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 AC009102.2-201ENST00000606772 1639 ntBASIC24.86■■□□□ 1.57
PCDHB7Q9Y5E2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB7Q9Y5E2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB7Q9Y5E2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHB7Q9Y5E2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.85■■□□□ 1.57
PCDHB7Q9Y5E2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 AC091305.1-201ENST00000479476 895 ntBASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHB7Q9Y5E2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PCDHB7Q9Y5E2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHB7Q9Y5E2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.83■■□□□ 1.56
PCDHB7Q9Y5E2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.83■■□□□ 1.56
PCDHB7Q9Y5E2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHB7Q9Y5E2 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.82■■□□□ 1.56
PCDHB7Q9Y5E2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHB7Q9Y5E2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms