Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 UNC93B8-201ENST00000511903 705 ntBASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RPH3AQ9Y2J0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 AL139125.2-201ENST00000623134 1869 ntBASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPH3AQ9Y2J0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPH3AQ9Y2J0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 KRT16P3-201ENST00000439127 1283 ntBASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPH3AQ9Y2J0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 MTDHP2-201ENST00000601468 714 ntBASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3AQ9Y2J0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3AQ9Y2J0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 AC010997.5-201ENST00000609182 354 ntBASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RPH3AQ9Y2J0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 SNX5-217ENST00000606557 1087 ntBASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3AQ9Y2J0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPH3AQ9Y2J0 AC131274.2-201ENST00000580697 1507 ntBASIC20.89■□□□□ 0.94
RPH3AQ9Y2J0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.89■□□□□ 0.93
RPH3AQ9Y2J0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.89■□□□□ 0.93
RPH3AQ9Y2J0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.89■□□□□ 0.93
RPH3AQ9Y2J0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms