Protein–RNA interactions for Protein: Q9NUS5

AP5S1, AP-5 complex subunit sigma-1, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1Q9NUS5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP5S1Q9NUS5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 LINC00526-201ENST00000581067 1875 ntBASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 C1orf229-201ENST00000623686 2258 ntBASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.9■□□□□ 0.3
AP5S1Q9NUS5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP5S1Q9NUS5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP5S1Q9NUS5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP5S1Q9NUS5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP5S1Q9NUS5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP5S1Q9NUS5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP5S1Q9NUS5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP5S1Q9NUS5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP5S1Q9NUS5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP5S1Q9NUS5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.83■□□□□ 0.28
AP5S1Q9NUS5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms