Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 EDA-201ENST00000338901 1233 ntBASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.71■■□□□ 1.87
RPAP3Q9H6T3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
RPAP3Q9H6T3 AC145676.1-201ENST00000514988 2004 ntBASIC26.7■■□□□ 1.87
RPAP3Q9H6T3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
RPAP3Q9H6T3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
RPAP3Q9H6T3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.7■■□□□ 1.86
RPAP3Q9H6T3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RPAP3Q9H6T3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RPAP3Q9H6T3 AL355001.2-201ENST00000620617 1191 ntBASIC26.7■■□□□ 1.86
RPAP3Q9H6T3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RPAP3Q9H6T3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
RPAP3Q9H6T3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.69■■□□□ 1.86
RPAP3Q9H6T3 AL022069.1-201ENST00000568025 1636 ntBASIC26.68■■□□□ 1.86
RPAP3Q9H6T3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.68■■□□□ 1.86
RPAP3Q9H6T3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.68■■□□□ 1.86
RPAP3Q9H6T3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.68■■□□□ 1.86
RPAP3Q9H6T3 DUX4L19-201ENST00000557448 1267 ntBASIC26.68■■□□□ 1.86
RPAP3Q9H6T3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPAP3Q9H6T3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP3Q9H6T3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
RPAP3Q9H6T3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 SYT6-210ENST00000641643 1587 ntBASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
RPAP3Q9H6T3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
RPAP3Q9H6T3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RPAP3Q9H6T3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.64■■□□□ 1.86
RPAP3Q9H6T3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.64■■□□□ 1.85
RPAP3Q9H6T3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.64■■□□□ 1.85
RPAP3Q9H6T3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 AF213884.3-201ENST00000563833 479 ntBASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 AL136967.2-201ENST00000623968 743 ntBASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.63■■□□□ 1.85
RPAP3Q9H6T3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 AC009102.2-201ENST00000606772 1639 ntBASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 AC099791.2-201ENST00000605725 427 ntBASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.62■■□□□ 1.85
RPAP3Q9H6T3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 RARRES2P6-201ENST00000567333 442 ntBASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 AC092171.4-201ENST00000609130 632 ntBASIC26.61■■□□□ 1.85
RPAP3Q9H6T3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms