Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KCNF1Q9H3M0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNF1Q9H3M0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNF1Q9H3M0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
KCNF1Q9H3M0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
KCNF1Q9H3M0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KCNF1Q9H3M0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.22■■□□□ 1.63
KCNF1Q9H3M0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.22■■□□□ 1.63
KCNF1Q9H3M0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.22■■□□□ 1.63
KCNF1Q9H3M0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
KCNF1Q9H3M0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 AL137060.1-201ENST00000618151 2648 ntBASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
KCNF1Q9H3M0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 LINC01971-201ENST00000617888 1048 ntBASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.2■■□□□ 1.62
KCNF1Q9H3M0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.19■■□□□ 1.62
KCNF1Q9H3M0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNF1Q9H3M0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNF1Q9H3M0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 FOXO3B-201ENST00000395675 1928 ntBASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNF1Q9H3M0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.15■■□□□ 1.62
KCNF1Q9H3M0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNF1Q9H3M0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
KCNF1Q9H3M0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.15■■□□□ 1.62
KCNF1Q9H3M0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
KCNF1Q9H3M0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KCNF1Q9H3M0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
KCNF1Q9H3M0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
KCNF1Q9H3M0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
KCNF1Q9H3M0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.14■■□□□ 1.62
KCNF1Q9H3M0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
KCNF1Q9H3M0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
KCNF1Q9H3M0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNF1Q9H3M0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.13■■□□□ 1.61
KCNF1Q9H3M0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNF1Q9H3M0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KCNF1Q9H3M0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNF1Q9H3M0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KCNF1Q9H3M0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.12■■□□□ 1.61
KCNF1Q9H3M0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.12■■□□□ 1.61
KCNF1Q9H3M0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNF1Q9H3M0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.12■■□□□ 1.61
KCNF1Q9H3M0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNF1Q9H3M0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KCNF1Q9H3M0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNF1Q9H3M0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.11■■□□□ 1.61
KCNF1Q9H3M0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KCNF1Q9H3M0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNF1Q9H3M0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNF1Q9H3M0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.11■■□□□ 1.61
KCNF1Q9H3M0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNF1Q9H3M0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.1■■□□□ 1.61
KCNF1Q9H3M0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNF1Q9H3M0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNF1Q9H3M0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNF1Q9H3M0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNF1Q9H3M0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms