Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS16Q9H269 AL592295.1-201ENST00000400984 884 ntBASIC25.24■■□□□ 1.63
VPS16Q9H269 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.24■■□□□ 1.63
VPS16Q9H269 U85056.1-201ENST00000616429 682 ntBASIC25.24■■□□□ 1.63
VPS16Q9H269 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS16Q9H269 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
VPS16Q9H269 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS16Q9H269 RARRES2P2-201ENST00000394842 485 ntBASIC25.23■■□□□ 1.63
VPS16Q9H269 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.23■■□□□ 1.63
VPS16Q9H269 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.23■■□□□ 1.63
VPS16Q9H269 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
VPS16Q9H269 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.23■■□□□ 1.63
VPS16Q9H269 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS16Q9H269 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
VPS16Q9H269 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS16Q9H269 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS16Q9H269 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS16Q9H269 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS16Q9H269 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
VPS16Q9H269 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.22■■□□□ 1.63
VPS16Q9H269 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS16Q9H269 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.22■■□□□ 1.63
VPS16Q9H269 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS16Q9H269 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS16Q9H269 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.22■■□□□ 1.63
VPS16Q9H269 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS16Q9H269 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
VPS16Q9H269 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.21■■□□□ 1.63
VPS16Q9H269 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS16Q9H269 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS16Q9H269 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
VPS16Q9H269 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
VPS16Q9H269 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
VPS16Q9H269 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
VPS16Q9H269 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
VPS16Q9H269 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
VPS16Q9H269 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
VPS16Q9H269 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
VPS16Q9H269 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
VPS16Q9H269 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.19■■□□□ 1.62
VPS16Q9H269 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
VPS16Q9H269 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VPS16Q9H269 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.18■■□□□ 1.62
VPS16Q9H269 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
VPS16Q9H269 AC129492.7-201ENST00000622992 756 ntBASIC25.18■■□□□ 1.62
VPS16Q9H269 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VPS16Q9H269 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VPS16Q9H269 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VPS16Q9H269 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.17■■□□□ 1.62
VPS16Q9H269 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
VPS16Q9H269 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
VPS16Q9H269 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS16Q9H269 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.17■■□□□ 1.62
VPS16Q9H269 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VPS16Q9H269 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
VPS16Q9H269 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
VPS16Q9H269 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.17■■□□□ 1.62
VPS16Q9H269 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.17■■□□□ 1.62
VPS16Q9H269 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VPS16Q9H269 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
VPS16Q9H269 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VPS16Q9H269 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VPS16Q9H269 LONRF2P2-201ENST00000439212 571 ntBASIC25.16■■□□□ 1.62
VPS16Q9H269 HSD17B1P1-201ENST00000590052 955 ntBASIC25.16■■□□□ 1.62
VPS16Q9H269 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.16■■□□□ 1.62
VPS16Q9H269 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
VPS16Q9H269 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.16■■□□□ 1.62
VPS16Q9H269 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS16Q9H269 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
VPS16Q9H269 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS16Q9H269 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS16Q9H269 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
VPS16Q9H269 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.15■■□□□ 1.62
VPS16Q9H269 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
VPS16Q9H269 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
VPS16Q9H269 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.15■■□□□ 1.62
VPS16Q9H269 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VPS16Q9H269 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
VPS16Q9H269 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.14■■□□□ 1.62
VPS16Q9H269 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.14■■□□□ 1.62
VPS16Q9H269 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
VPS16Q9H269 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.14■■□□□ 1.62
VPS16Q9H269 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VPS16Q9H269 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.14■■□□□ 1.61
VPS16Q9H269 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VPS16Q9H269 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
VPS16Q9H269 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VPS16Q9H269 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VPS16Q9H269 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.13■■□□□ 1.61
VPS16Q9H269 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
VPS16Q9H269 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS16Q9H269 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
VPS16Q9H269 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.13■■□□□ 1.61
VPS16Q9H269 KRT18P60-201ENST00000312876 1297 ntBASIC25.13■■□□□ 1.61
VPS16Q9H269 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS16Q9H269 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.13■■□□□ 1.61
VPS16Q9H269 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.13■■□□□ 1.61
VPS16Q9H269 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS16Q9H269 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
VPS16Q9H269 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms