Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SPTBN4Q9H254 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.5■■□□□ 1.19
SPTBN4Q9H254 AC245100.8-202ENST00000629247 1058 ntBASIC22.5■■□□□ 1.19
SPTBN4Q9H254 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SPTBN4Q9H254 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SPTBN4Q9H254 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SPTBN4Q9H254 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.49■■□□□ 1.19
SPTBN4Q9H254 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.49■■□□□ 1.19
SPTBN4Q9H254 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPTBN4Q9H254 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.49■■□□□ 1.19
SPTBN4Q9H254 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SPTBN4Q9H254 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 KRT18P61-201ENST00000585825 1298 ntBASIC22.48■■□□□ 1.19
SPTBN4Q9H254 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SPTBN4Q9H254 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.47■■□□□ 1.19
SPTBN4Q9H254 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SPTBN4Q9H254 KRT18P6-201ENST00000555540 1265 ntBASIC22.47■■□□□ 1.19
SPTBN4Q9H254 AC137761.2-201ENST00000561729 223 ntBASIC22.47■■□□□ 1.19
SPTBN4Q9H254 AC145350.3-201ENST00000569033 163 ntBASIC22.47■■□□□ 1.19
SPTBN4Q9H254 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
SPTBN4Q9H254 MIR663A-201ENST00000385250 93 ntBASIC22.47■■□□□ 1.19
SPTBN4Q9H254 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SPTBN4Q9H254 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.46■■□□□ 1.19
SPTBN4Q9H254 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPTBN4Q9H254 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPTBN4Q9H254 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
SPTBN4Q9H254 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
SPTBN4Q9H254 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 AC012414.1-201ENST00000556676 535 ntBASIC22.45■■□□□ 1.18
SPTBN4Q9H254 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 C17orf82-201ENST00000623772 1530 ntBASIC22.45■■□□□ 1.18
SPTBN4Q9H254 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.45■■□□□ 1.18
SPTBN4Q9H254 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
SPTBN4Q9H254 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.44■■□□□ 1.18
SPTBN4Q9H254 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.44■■□□□ 1.18
SPTBN4Q9H254 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.44■■□□□ 1.18
SPTBN4Q9H254 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.44■■□□□ 1.18
SPTBN4Q9H254 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.44■■□□□ 1.18
SPTBN4Q9H254 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.43■■□□□ 1.18
SPTBN4Q9H254 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SPTBN4Q9H254 MIR6084-201ENST00000622012 110 ntBASIC22.43■■□□□ 1.18
SPTBN4Q9H254 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SPTBN4Q9H254 AC006455.2-201ENST00000429931 906 ntBASIC22.43■■□□□ 1.18
SPTBN4Q9H254 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.43■■□□□ 1.18
SPTBN4Q9H254 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.43■■□□□ 1.18
SPTBN4Q9H254 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.42■■□□□ 1.18
SPTBN4Q9H254 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SPTBN4Q9H254 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 GPX1P1-201ENST00000388829 606 ntBASIC22.41■■□□□ 1.18
SPTBN4Q9H254 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.41■■□□□ 1.18
SPTBN4Q9H254 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.4■■□□□ 1.18
SPTBN4Q9H254 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
SPTBN4Q9H254 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.39■■□□□ 1.17
SPTBN4Q9H254 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SPTBN4Q9H254 PRORSD1P-201ENST00000295112 541 ntBASIC22.38■■□□□ 1.17
SPTBN4Q9H254 MIR572-201ENST00000384983 95 ntBASIC22.38■■□□□ 1.17
SPTBN4Q9H254 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.38■■□□□ 1.17
SPTBN4Q9H254 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.38■■□□□ 1.17
SPTBN4Q9H254 AL449106.1-201ENST00000608517 1980 ntBASIC22.38■■□□□ 1.17
SPTBN4Q9H254 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.38■■□□□ 1.17
SPTBN4Q9H254 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.38■■□□□ 1.17
SPTBN4Q9H254 AC009102.2-201ENST00000606772 1639 ntBASIC22.38■■□□□ 1.17
SPTBN4Q9H254 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.38■■□□□ 1.17
SPTBN4Q9H254 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms