Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRDL1Q9BU40 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRDL1Q9BU40 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 LONRF2P2-201ENST00000439212 571 ntBASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRDL1Q9BU40 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 AC141586.4-201ENST00000624558 1573 ntBASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRDL1Q9BU40 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRDL1Q9BU40 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRDL1Q9BU40 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CHRDL1Q9BU40 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRDL1Q9BU40 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRDL1Q9BU40 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHRDL1Q9BU40 AC004987.1-201ENST00000428627 508 ntBASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 ATP5G2P3-201ENST00000429083 425 ntBASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 HLA-L-211ENST00000482052 1765 ntBASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRDL1Q9BU40 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRDL1Q9BU40 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 AL592295.1-201ENST00000400984 884 ntBASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 AC139795.1-202ENST00000500444 432 ntBASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 DUSP8P5-201ENST00000422884 1815 ntBASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRDL1Q9BU40 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRDL1Q9BU40 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRDL1Q9BU40 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRDL1Q9BU40 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms