Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NICN1Q9BSH3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 AC079834.2-201ENST00000609776 1949 ntBASIC19.65■□□□□ 0.74
NICN1Q9BSH3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NICN1Q9BSH3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
NICN1Q9BSH3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.64■□□□□ 0.74
NICN1Q9BSH3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NICN1Q9BSH3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NICN1Q9BSH3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NICN1Q9BSH3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NICN1Q9BSH3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 GPX1-201ENST00000419349 1106 ntBASIC19.61■□□□□ 0.73
NICN1Q9BSH3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NICN1Q9BSH3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 AC009831.1-201ENST00000580420 1582 ntBASIC19.6■□□□□ 0.73
NICN1Q9BSH3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NICN1Q9BSH3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NICN1Q9BSH3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.58■□□□□ 0.73
NICN1Q9BSH3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NICN1Q9BSH3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NICN1Q9BSH3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NICN1Q9BSH3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NICN1Q9BSH3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.58■□□□□ 0.72
NICN1Q9BSH3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.58■□□□□ 0.72
NICN1Q9BSH3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NICN1Q9BSH3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NICN1Q9BSH3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NICN1Q9BSH3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms