Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.51■□□□□ 0.71
CITED4Q96RK1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CITED4Q96RK1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.51■□□□□ 0.71
CITED4Q96RK1 AC127496.7-201ENST00000625110 1798 ntBASIC19.51■□□□□ 0.71
CITED4Q96RK1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CITED4Q96RK1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CITED4Q96RK1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.5■□□□□ 0.71
CITED4Q96RK1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CITED4Q96RK1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CITED4Q96RK1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CITED4Q96RK1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.5■□□□□ 0.71
CITED4Q96RK1 AC021231.2-201ENST00000594613 730 ntBASIC19.5■□□□□ 0.71
CITED4Q96RK1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.5■□□□□ 0.71
CITED4Q96RK1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CITED4Q96RK1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CITED4Q96RK1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CITED4Q96RK1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CITED4Q96RK1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CITED4Q96RK1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CITED4Q96RK1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CITED4Q96RK1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CITED4Q96RK1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.48■□□□□ 0.71
CITED4Q96RK1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CITED4Q96RK1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CITED4Q96RK1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CITED4Q96RK1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CITED4Q96RK1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CITED4Q96RK1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CITED4Q96RK1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CITED4Q96RK1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.47■□□□□ 0.71
CITED4Q96RK1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.47■□□□□ 0.71
CITED4Q96RK1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.47■□□□□ 0.71
CITED4Q96RK1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CITED4Q96RK1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CITED4Q96RK1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CITED4Q96RK1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CITED4Q96RK1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CITED4Q96RK1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CITED4Q96RK1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.45■□□□□ 0.7
CITED4Q96RK1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 AP003733.4-201ENST00000623785 1697 ntBASIC19.45■□□□□ 0.7
CITED4Q96RK1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CITED4Q96RK1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.44■□□□□ 0.7
CITED4Q96RK1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CITED4Q96RK1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.44■□□□□ 0.7
CITED4Q96RK1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.44■□□□□ 0.7
CITED4Q96RK1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.44■□□□□ 0.7
CITED4Q96RK1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CITED4Q96RK1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CITED4Q96RK1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.43■□□□□ 0.7
CITED4Q96RK1 MIR3648-2-201ENST00000581792 180 ntBASIC19.43■□□□□ 0.7
CITED4Q96RK1 MIR3648-1-201ENST00000615959 180 ntBASIC19.43■□□□□ 0.7
CITED4Q96RK1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.43■□□□□ 0.7
CITED4Q96RK1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CITED4Q96RK1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CITED4Q96RK1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CITED4Q96RK1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CITED4Q96RK1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CITED4Q96RK1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CITED4Q96RK1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CITED4Q96RK1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms