Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 FOXO3B-201ENST00000395675 1928 ntBASIC19.8■□□□□ 0.76
CMTM3Q96MX0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CMTM3Q96MX0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CMTM3Q96MX0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMTM3Q96MX0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 AL161729.1-201ENST00000604104 1402 ntBASIC19.79■□□□□ 0.76
CMTM3Q96MX0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 DUX4L11-201ENST00000611504 1267 ntBASIC19.79■□□□□ 0.76
CMTM3Q96MX0 DUX4L12-201ENST00000614593 1267 ntBASIC19.79■□□□□ 0.76
CMTM3Q96MX0 DUX4L14-201ENST00000621227 1267 ntBASIC19.79■□□□□ 0.76
CMTM3Q96MX0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMTM3Q96MX0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CMTM3Q96MX0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CMTM3Q96MX0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.78■□□□□ 0.76
CMTM3Q96MX0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.78■□□□□ 0.76
CMTM3Q96MX0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CMTM3Q96MX0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CMTM3Q96MX0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMTM3Q96MX0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 KRT18P10-201ENST00000388836 1287 ntBASIC19.76■□□□□ 0.75
CMTM3Q96MX0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CMTM3Q96MX0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.75■□□□□ 0.75
CMTM3Q96MX0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CMTM3Q96MX0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMTM3Q96MX0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CMTM3Q96MX0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMTM3Q96MX0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMTM3Q96MX0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 ESRRAP2-201ENST00000418437 1549 ntBASIC19.74■□□□□ 0.75
CMTM3Q96MX0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.74■□□□□ 0.75
CMTM3Q96MX0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMTM3Q96MX0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMTM3Q96MX0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMTM3Q96MX0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMTM3Q96MX0 AC242852.2-201ENST00000615738 1807 ntBASIC19.72■□□□□ 0.75
CMTM3Q96MX0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMTM3Q96MX0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CMTM3Q96MX0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMTM3Q96MX0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMTM3Q96MX0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms