Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.8■■□□□ 1.4
PRICKLE1Q96MT3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRICKLE1Q96MT3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.8■■□□□ 1.4
PRICKLE1Q96MT3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.8■■□□□ 1.4
PRICKLE1Q96MT3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.8■■□□□ 1.4
PRICKLE1Q96MT3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRICKLE1Q96MT3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRICKLE1Q96MT3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
PRICKLE1Q96MT3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.79■■□□□ 1.4
PRICKLE1Q96MT3 AC004448.1-201ENST00000458332 883 ntBASIC23.79■■□□□ 1.4
PRICKLE1Q96MT3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.79■■□□□ 1.4
PRICKLE1Q96MT3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.79■■□□□ 1.4
PRICKLE1Q96MT3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
PRICKLE1Q96MT3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRICKLE1Q96MT3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRICKLE1Q96MT3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRICKLE1Q96MT3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.78■■□□□ 1.4
PRICKLE1Q96MT3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 MIR6724-1-201ENST00000616420 92 ntBASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 MIR6724-2-201ENST00000616483 92 ntBASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 MIR6724-4-201ENST00000617390 92 ntBASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 MIR6724-3-201ENST00000622482 92 ntBASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRICKLE1Q96MT3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
PRICKLE1Q96MT3 AP003733.4-201ENST00000623785 1697 ntBASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRICKLE1Q96MT3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 MIR6722-201ENST00000617286 78 ntBASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 AL117332.1-201ENST00000622628 974 ntBASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRICKLE1Q96MT3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.74■■□□□ 1.39
PRICKLE1Q96MT3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.73■■□□□ 1.39
PRICKLE1Q96MT3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRICKLE1Q96MT3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRICKLE1Q96MT3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PRICKLE1Q96MT3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PRICKLE1Q96MT3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PRICKLE1Q96MT3 AL022069.1-201ENST00000568025 1636 ntBASIC23.7■■□□□ 1.39
PRICKLE1Q96MT3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms