Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 AL136967.2-201ENST00000623968 743 ntBASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
ZSWIM3Q96MP5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 RARRES2P6-201ENST00000567333 442 ntBASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.94■■□□□ 1.42
ZSWIM3Q96MP5 DUSP8P4-201ENST00000399538 1761 ntBASIC23.93■■□□□ 1.42
ZSWIM3Q96MP5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZSWIM3Q96MP5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZSWIM3Q96MP5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZSWIM3Q96MP5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 AC026271.2-201ENST00000428091 497 ntBASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 AF213884.3-201ENST00000563833 479 ntBASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZSWIM3Q96MP5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 DUX4L19-201ENST00000557448 1267 ntBASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 MIR6089-201ENST00000616698 64 ntBASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.9■■□□□ 1.42
ZSWIM3Q96MP5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
ZSWIM3Q96MP5 AC091060.1-201ENST00000623524 1766 ntBASIC23.89■■□□□ 1.42
ZSWIM3Q96MP5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
ZSWIM3Q96MP5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 SYT6-210ENST00000641643 1587 ntBASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 MIR939-201ENST00000401314 82 ntBASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 AC105265.2-201ENST00000467189 838 ntBASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 AC099791.2-201ENST00000605725 427 ntBASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.88■■□□□ 1.41
ZSWIM3Q96MP5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 AP001330.3-201ENST00000520123 633 ntBASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
ZSWIM3Q96MP5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 AC009102.2-201ENST00000606772 1639 ntBASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 SERBP1P1-201ENST00000396021 1160 ntBASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 MIR4767-201ENST00000582827 78 ntBASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ZSWIM3Q96MP5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.85■■□□□ 1.41
ZSWIM3Q96MP5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 AL022069.1-201ENST00000568025 1636 ntBASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms