Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LRRC46Q96FV0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC46Q96FV0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC46Q96FV0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LRRC46Q96FV0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC46Q96FV0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC46Q96FV0 AC097639.1-201ENST00000565519 1891 ntBASIC20.53■□□□□ 0.88
LRRC46Q96FV0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC46Q96FV0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 AC096631.2-201ENST00000436136 790 ntBASIC20.52■□□□□ 0.88
LRRC46Q96FV0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LRRC46Q96FV0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC46Q96FV0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC46Q96FV0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 AC133561.4-201ENST00000566112 224 ntBASIC20.5■□□□□ 0.87
LRRC46Q96FV0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC46Q96FV0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC46Q96FV0 SNX5-217ENST00000606557 1087 ntBASIC20.49■□□□□ 0.87
LRRC46Q96FV0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC46Q96FV0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC46Q96FV0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC46Q96FV0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 MIR4466-201ENST00000606121 54 ntBASIC20.47■□□□□ 0.87
LRRC46Q96FV0 AC110285.6-201ENST00000617652 491 ntBASIC20.47■□□□□ 0.87
LRRC46Q96FV0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.47■□□□□ 0.87
LRRC46Q96FV0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 AC005837.3-201ENST00000612163 286 ntBASIC20.46■□□□□ 0.87
LRRC46Q96FV0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC46Q96FV0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 AL512631.2-201ENST00000604634 923 ntBASIC20.45■□□□□ 0.86
LRRC46Q96FV0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC46Q96FV0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms