Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
C3orf49Q96BT1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C3orf49Q96BT1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 AC103834.1-201ENST00000520383 144 ntBASIC20.93■□□□□ 0.94
C3orf49Q96BT1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.93■□□□□ 0.94
C3orf49Q96BT1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 MIR4281-201ENST00000580852 62 ntBASIC20.92■□□□□ 0.94
C3orf49Q96BT1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 AL022069.1-201ENST00000568025 1636 ntBASIC20.92■□□□□ 0.94
C3orf49Q96BT1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C3orf49Q96BT1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 AC131274.2-201ENST00000580697 1507 ntBASIC20.91■□□□□ 0.94
C3orf49Q96BT1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
C3orf49Q96BT1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C3orf49Q96BT1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
C3orf49Q96BT1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.89■□□□□ 0.94
C3orf49Q96BT1 KRT8P33-201ENST00000508125 1423 ntBASIC20.89■□□□□ 0.94
C3orf49Q96BT1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.89■□□□□ 0.93
C3orf49Q96BT1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C3orf49Q96BT1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
C3orf49Q96BT1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
C3orf49Q96BT1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
C3orf49Q96BT1 AF131216.4-201ENST00000638924 1588 ntBASIC20.89■□□□□ 0.93
C3orf49Q96BT1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C3orf49Q96BT1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C3orf49Q96BT1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C3orf49Q96BT1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.87■□□□□ 0.93
C3orf49Q96BT1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
C3orf49Q96BT1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.87■□□□□ 0.93
C3orf49Q96BT1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C3orf49Q96BT1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 YBX1P4-201ENST00000392794 808 ntBASIC20.86■□□□□ 0.93
C3orf49Q96BT1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C3orf49Q96BT1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C3orf49Q96BT1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms