Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
AP3S1Q92572 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3S1Q92572 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.22■□□□□ 0.83
AP3S1Q92572 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3S1Q92572 DUSP8P3-201ENST00000399571 1760 ntBASIC20.22■□□□□ 0.83
AP3S1Q92572 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.22■□□□□ 0.83
AP3S1Q92572 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.22■□□□□ 0.83
AP3S1Q92572 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3S1Q92572 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3S1Q92572 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3S1Q92572 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
AP3S1Q92572 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3S1Q92572 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3S1Q92572 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3S1Q92572 AL024507.2-201ENST00000606070 2574 ntBASIC20.21■□□□□ 0.83
AP3S1Q92572 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3S1Q92572 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.21■□□□□ 0.83
AP3S1Q92572 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
AP3S1Q92572 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.21■□□□□ 0.83
AP3S1Q92572 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.21■□□□□ 0.83
AP3S1Q92572 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3S1Q92572 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
AP3S1Q92572 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.21■□□□□ 0.83
AP3S1Q92572 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
AP3S1Q92572 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.2■□□□□ 0.82
AP3S1Q92572 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3S1Q92572 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.2■□□□□ 0.82
AP3S1Q92572 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3S1Q92572 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
AP3S1Q92572 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.2■□□□□ 0.82
AP3S1Q92572 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.2■□□□□ 0.82
AP3S1Q92572 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3S1Q92572 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3S1Q92572 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3S1Q92572 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
AP3S1Q92572 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3S1Q92572 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3S1Q92572 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3S1Q92572 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 AC092068.2-201ENST00000590491 1708 ntBASIC20.19■□□□□ 0.82
AP3S1Q92572 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3S1Q92572 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP3S1Q92572 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3S1Q92572 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
AP3S1Q92572 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.18■□□□□ 0.82
AP3S1Q92572 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.18■□□□□ 0.82
AP3S1Q92572 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
AP3S1Q92572 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.18■□□□□ 0.82
AP3S1Q92572 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3S1Q92572 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.18■□□□□ 0.82
AP3S1Q92572 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.17■□□□□ 0.82
AP3S1Q92572 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.17■□□□□ 0.82
AP3S1Q92572 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3S1Q92572 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
AP3S1Q92572 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.16■□□□□ 0.82
AP3S1Q92572 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP3S1Q92572 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AP3S1Q92572 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3S1Q92572 FOXO3B-201ENST00000395675 1928 ntBASIC20.15■□□□□ 0.82
AP3S1Q92572 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3S1Q92572 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
AP3S1Q92572 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.15■□□□□ 0.82
AP3S1Q92572 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.15■□□□□ 0.82
AP3S1Q92572 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3S1Q92572 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3S1Q92572 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.15■□□□□ 0.82
AP3S1Q92572 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
AP3S1Q92572 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3S1Q92572 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms