Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 AC018755.3-202ENST00000596210 929 ntBASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40AQ8WXH6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40AQ8WXH6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB40AQ8WXH6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB40AQ8WXH6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB40AQ8WXH6 SPCS2P3-201ENST00000500401 656 ntBASIC20.08■□□□□ 0.81
RAB40AQ8WXH6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.08■□□□□ 0.81
RAB40AQ8WXH6 MIR6765-201ENST00000614092 87 ntBASIC20.08■□□□□ 0.81
RAB40AQ8WXH6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40AQ8WXH6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RAB40AQ8WXH6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40AQ8WXH6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40AQ8WXH6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40AQ8WXH6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40AQ8WXH6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40AQ8WXH6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB40AQ8WXH6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 HLA-L-211ENST00000482052 1765 ntBASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 BHLHE23-202ENST00000612929 1109 ntBASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB40AQ8WXH6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RAB40AQ8WXH6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms