Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R1Q8TF05 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PPP4R1Q8TF05 AL592293.1-201ENST00000502889 1188 ntBASIC22.9■■□□□ 1.26
PPP4R1Q8TF05 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PPP4R1Q8TF05 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PPP4R1Q8TF05 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PPP4R1Q8TF05 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PPP4R1Q8TF05 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
PPP4R1Q8TF05 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
PPP4R1Q8TF05 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.89■■□□□ 1.25
PPP4R1Q8TF05 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PPP4R1Q8TF05 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.89■■□□□ 1.25
PPP4R1Q8TF05 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PPP4R1Q8TF05 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.88■■□□□ 1.25
PPP4R1Q8TF05 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R1Q8TF05 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.88■■□□□ 1.25
PPP4R1Q8TF05 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.88■■□□□ 1.25
PPP4R1Q8TF05 FOXO3B-201ENST00000395675 1928 ntBASIC22.88■■□□□ 1.25
PPP4R1Q8TF05 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PPP4R1Q8TF05 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.87■■□□□ 1.25
PPP4R1Q8TF05 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 RARRES2P1-201ENST00000474487 481 ntBASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R1Q8TF05 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R1Q8TF05 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R1Q8TF05 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PPP4R1Q8TF05 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PPP4R1Q8TF05 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.83■■□□□ 1.25
PPP4R1Q8TF05 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PPP4R1Q8TF05 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PPP4R1Q8TF05 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PPP4R1Q8TF05 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 DUX4L18-201ENST00000553347 1267 ntBASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PPP4R1Q8TF05 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 C9orf163-202ENST00000624034 2573 ntBASIC22.8■■□□□ 1.24
PPP4R1Q8TF05 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms