Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK11Q8NG66 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK11Q8NG66 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.08■■□□□ 1.61
NEK11Q8NG66 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK11Q8NG66 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK11Q8NG66 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NEK11Q8NG66 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.08■■□□□ 1.61
NEK11Q8NG66 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
NEK11Q8NG66 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
NEK11Q8NG66 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NEK11Q8NG66 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK11Q8NG66 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
NEK11Q8NG66 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.07■■□□□ 1.6
NEK11Q8NG66 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NEK11Q8NG66 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK11Q8NG66 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
NEK11Q8NG66 HSD17B1P1-201ENST00000590052 955 ntBASIC25.07■■□□□ 1.6
NEK11Q8NG66 U85056.1-201ENST00000616429 682 ntBASIC25.07■■□□□ 1.6
NEK11Q8NG66 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.07■■□□□ 1.6
NEK11Q8NG66 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NEK11Q8NG66 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.07■■□□□ 1.6
NEK11Q8NG66 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK11Q8NG66 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
NEK11Q8NG66 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NEK11Q8NG66 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK11Q8NG66 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK11Q8NG66 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
NEK11Q8NG66 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
NEK11Q8NG66 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
NEK11Q8NG66 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.06■■□□□ 1.6
NEK11Q8NG66 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
NEK11Q8NG66 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK11Q8NG66 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.05■■□□□ 1.6
NEK11Q8NG66 DUSP8P5-201ENST00000422884 1815 ntBASIC25.05■■□□□ 1.6
NEK11Q8NG66 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK11Q8NG66 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
NEK11Q8NG66 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.05■■□□□ 1.6
NEK11Q8NG66 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
NEK11Q8NG66 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NEK11Q8NG66 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NEK11Q8NG66 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NEK11Q8NG66 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.05■■□□□ 1.6
NEK11Q8NG66 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK11Q8NG66 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK11Q8NG66 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK11Q8NG66 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
NEK11Q8NG66 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NEK11Q8NG66 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
NEK11Q8NG66 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.03■■□□□ 1.6
NEK11Q8NG66 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK11Q8NG66 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.03■■□□□ 1.6
NEK11Q8NG66 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NEK11Q8NG66 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK11Q8NG66 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK11Q8NG66 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK11Q8NG66 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NEK11Q8NG66 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
NEK11Q8NG66 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NEK11Q8NG66 AC129492.7-201ENST00000622992 756 ntBASIC25.02■■□□□ 1.6
NEK11Q8NG66 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NEK11Q8NG66 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.02■■□□□ 1.6
NEK11Q8NG66 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
NEK11Q8NG66 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.01■■□□□ 1.59
NEK11Q8NG66 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
NEK11Q8NG66 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.01■■□□□ 1.59
NEK11Q8NG66 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
NEK11Q8NG66 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
NEK11Q8NG66 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.01■■□□□ 1.59
NEK11Q8NG66 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
NEK11Q8NG66 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
NEK11Q8NG66 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
NEK11Q8NG66 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NEK11Q8NG66 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
NEK11Q8NG66 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NEK11Q8NG66 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25■■□□□ 1.59
NEK11Q8NG66 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25■■□□□ 1.59
NEK11Q8NG66 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NEK11Q8NG66 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK11Q8NG66 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK11Q8NG66 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.99■■□□□ 1.59
NEK11Q8NG66 LONRF2P2-201ENST00000439212 571 ntBASIC24.99■■□□□ 1.59
NEK11Q8NG66 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.99■■□□□ 1.59
NEK11Q8NG66 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NEK11Q8NG66 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NEK11Q8NG66 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK11Q8NG66 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK11Q8NG66 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NEK11Q8NG66 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NEK11Q8NG66 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.98■■□□□ 1.59
NEK11Q8NG66 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NEK11Q8NG66 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NEK11Q8NG66 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.98■■□□□ 1.59
NEK11Q8NG66 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
NEK11Q8NG66 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK11Q8NG66 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK11Q8NG66 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK11Q8NG66 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK11Q8NG66 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
NEK11Q8NG66 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NEK11Q8NG66 KRT18P60-201ENST00000312876 1297 ntBASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms