Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LPCAT1Q8NF37 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LPCAT1Q8NF37 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.18■■□□□ 1.3
LPCAT1Q8NF37 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.17■■□□□ 1.3
LPCAT1Q8NF37 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LPCAT1Q8NF37 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LPCAT1Q8NF37 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LPCAT1Q8NF37 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.16■■□□□ 1.3
LPCAT1Q8NF37 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 SNX5-217ENST00000606557 1087 ntBASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LPCAT1Q8NF37 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
LPCAT1Q8NF37 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LPCAT1Q8NF37 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 AC004448.1-201ENST00000458332 883 ntBASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 AC092028.1-203ENST00000608262 953 ntBASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 AL161729.1-201ENST00000604104 1402 ntBASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LPCAT1Q8NF37 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 AC093323.1-202ENST00000635031 2045 ntBASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 TSPY9P-201ENST00000440215 945 ntBASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 TSPY11P-201ENST00000442607 1045 ntBASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 AC004812.2-201ENST00000611079 2094 ntBASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LPCAT1Q8NF37 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LPCAT1Q8NF37 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.11■■□□□ 1.29
LPCAT1Q8NF37 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
LPCAT1Q8NF37 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
LPCAT1Q8NF37 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
LPCAT1Q8NF37 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
LPCAT1Q8NF37 GUSBP5-201ENST00000418136 578 ntBASIC23.1■■□□□ 1.29
LPCAT1Q8NF37 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LPCAT1Q8NF37 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms