Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.04■□□□□ 0.96
LSMEM1Q8N8F7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSMEM1Q8N8F7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSMEM1Q8N8F7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LSMEM1Q8N8F7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
LSMEM1Q8N8F7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSMEM1Q8N8F7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 PVT1_1.1-201ENST00000615125 194 ntBASIC21■□□□□ 0.95
LSMEM1Q8N8F7 AC012354.3-201ENST00000623734 483 ntBASIC21■□□□□ 0.95
LSMEM1Q8N8F7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21■□□□□ 0.95
LSMEM1Q8N8F7 AL022069.1-201ENST00000568025 1636 ntBASIC21■□□□□ 0.95
LSMEM1Q8N8F7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.99■□□□□ 0.95
LSMEM1Q8N8F7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 KRT18P24-201ENST00000344739 1156 ntBASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSMEM1Q8N8F7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 AC120024.1-201ENST00000562672 995 ntBASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSMEM1Q8N8F7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 AC012676.1-201ENST00000574705 1949 ntBASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 AC010980.1-201ENST00000587192 1142 ntBASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSMEM1Q8N8F7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms