Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN22Q8N7P3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN22Q8N7P3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 KRT18P60-201ENST00000312876 1297 ntBASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 RPS2P7-201ENST00000447334 885 ntBASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN22Q8N7P3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 AC129492.7-201ENST00000622992 756 ntBASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN22Q8N7P3 AC090877.2-201ENST00000558441 1738 ntBASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN22Q8N7P3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 MIR6765-201ENST00000614092 87 ntBASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN22Q8N7P3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CLDN22Q8N7P3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLDN22Q8N7P3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 AC087393.1-201ENST00000582896 145 ntBASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.83■□□□□ 0.93
CLDN22Q8N7P3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN22Q8N7P3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN22Q8N7P3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN22Q8N7P3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN22Q8N7P3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN22Q8N7P3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CLDN22Q8N7P3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms