Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM20Q8N5G0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM20Q8N5G0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM20Q8N5G0 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.39□□□□□ -0.11
SMIM20Q8N5G0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SMIM20Q8N5G0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 AL020996.1-203ENST00000536896 2307 ntBASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 AC026310.3-201ENST00000625186 2373 ntBASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM20Q8N5G0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM20Q8N5G0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM20Q8N5G0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM20Q8N5G0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SMIM20Q8N5G0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM20Q8N5G0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM20Q8N5G0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM20Q8N5G0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM20Q8N5G0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms