Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC190Q86UF4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC190Q86UF4 AC242852.2-201ENST00000615738 1807 ntBASIC20.09■□□□□ 0.81
CCDC190Q86UF4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC190Q86UF4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC190Q86UF4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC190Q86UF4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC190Q86UF4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC190Q86UF4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC190Q86UF4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCDC190Q86UF4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC190Q86UF4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CCDC190Q86UF4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC190Q86UF4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
CCDC190Q86UF4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC190Q86UF4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC190Q86UF4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC190Q86UF4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC190Q86UF4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC190Q86UF4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 AL121603.2-201ENST00000557373 2117 ntBASIC20.02■□□□□ 0.8
CCDC190Q86UF4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC190Q86UF4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC190Q86UF4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC190Q86UF4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC190Q86UF4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC190Q86UF4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC190Q86UF4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC190Q86UF4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC190Q86UF4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC190Q86UF4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC190Q86UF4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC190Q86UF4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC190Q86UF4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20■□□□□ 0.79
CCDC190Q86UF4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC190Q86UF4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20■□□□□ 0.79
CCDC190Q86UF4 AL359258.2-201ENST00000564063 1566 ntBASIC20■□□□□ 0.79
CCDC190Q86UF4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20■□□□□ 0.79
CCDC190Q86UF4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20■□□□□ 0.79
CCDC190Q86UF4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC190Q86UF4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms