Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 AC142381.2-201ENST00000566120 298 ntBASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI1Q7Z5J4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RAI1Q7Z5J4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI1Q7Z5J4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI1Q7Z5J4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
RAI1Q7Z5J4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAI1Q7Z5J4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.78■□□□□ 0.76
RAI1Q7Z5J4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 EDA-201ENST00000338901 1233 ntBASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 AL136162.1-201ENST00000607711 1078 ntBASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAI1Q7Z5J4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.77■□□□□ 0.75
RAI1Q7Z5J4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI1Q7Z5J4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 AP001330.3-201ENST00000520123 633 ntBASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAI1Q7Z5J4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.74■□□□□ 0.75
RAI1Q7Z5J4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 AC005703.6-201ENST00000623265 1329 ntBASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAI1Q7Z5J4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 AC105265.2-201ENST00000467189 838 ntBASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 AF213884.3-201ENST00000563833 479 ntBASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAI1Q7Z5J4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 MIR939-201ENST00000401314 82 ntBASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 DUX4L19-201ENST00000557448 1267 ntBASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAI1Q7Z5J4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAI1Q7Z5J4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms