Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAPH1Q70E73 MIR6765-201ENST00000614092 87 ntBASIC22.97■■□□□ 1.27
RAPH1Q70E73 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.97■■□□□ 1.27
RAPH1Q70E73 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPH1Q70E73 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPH1Q70E73 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPH1Q70E73 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.97■■□□□ 1.27
RAPH1Q70E73 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 AC087393.1-201ENST00000582896 145 ntBASIC22.96■■□□□ 1.27
RAPH1Q70E73 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.96■■□□□ 1.27
RAPH1Q70E73 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 AC090877.2-201ENST00000558441 1738 ntBASIC22.96■■□□□ 1.27
RAPH1Q70E73 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.96■■□□□ 1.27
RAPH1Q70E73 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.96■■□□□ 1.27
RAPH1Q70E73 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPH1Q70E73 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPH1Q70E73 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.95■■□□□ 1.26
RAPH1Q70E73 DUX4L9-201ENST00000449051 1259 ntBASIC22.95■■□□□ 1.26
RAPH1Q70E73 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPH1Q70E73 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPH1Q70E73 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RAPH1Q70E73 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAPH1Q70E73 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAPH1Q70E73 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RAPH1Q70E73 RARRES2P2-201ENST00000394842 485 ntBASIC22.94■■□□□ 1.26
RAPH1Q70E73 AL592295.1-201ENST00000400984 884 ntBASIC22.94■■□□□ 1.26
RAPH1Q70E73 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAPH1Q70E73 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RAPH1Q70E73 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.93■■□□□ 1.26
RAPH1Q70E73 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAPH1Q70E73 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
RAPH1Q70E73 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
RAPH1Q70E73 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.93■■□□□ 1.26
RAPH1Q70E73 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RAPH1Q70E73 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RAPH1Q70E73 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAPH1Q70E73 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAPH1Q70E73 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAPH1Q70E73 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
RAPH1Q70E73 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.92■■□□□ 1.26
RAPH1Q70E73 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.92■■□□□ 1.26
RAPH1Q70E73 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.92■■□□□ 1.26
RAPH1Q70E73 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
RAPH1Q70E73 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
RAPH1Q70E73 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAPH1Q70E73 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPH1Q70E73 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAPH1Q70E73 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.91■■□□□ 1.26
RAPH1Q70E73 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAPH1Q70E73 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPH1Q70E73 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.91■■□□□ 1.26
RAPH1Q70E73 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPH1Q70E73 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPH1Q70E73 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPH1Q70E73 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
RAPH1Q70E73 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPH1Q70E73 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RAPH1Q70E73 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPH1Q70E73 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
RAPH1Q70E73 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPH1Q70E73 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPH1Q70E73 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RAPH1Q70E73 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RAPH1Q70E73 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.89■■□□□ 1.25
RAPH1Q70E73 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPH1Q70E73 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.89■■□□□ 1.25
RAPH1Q70E73 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPH1Q70E73 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPH1Q70E73 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPH1Q70E73 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPH1Q70E73 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPH1Q70E73 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPH1Q70E73 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPH1Q70E73 U85056.1-201ENST00000616429 682 ntBASIC22.88■■□□□ 1.25
RAPH1Q70E73 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPH1Q70E73 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPH1Q70E73 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPH1Q70E73 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPH1Q70E73 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPH1Q70E73 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RAPH1Q70E73 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
RAPH1Q70E73 HSD17B1P1-201ENST00000590052 955 ntBASIC22.87■■□□□ 1.25
RAPH1Q70E73 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.87■■□□□ 1.25
RAPH1Q70E73 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RAPH1Q70E73 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.86■■□□□ 1.25
RAPH1Q70E73 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RAPH1Q70E73 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPH1Q70E73 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RAPH1Q70E73 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAPH1Q70E73 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms