Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3CPQ6ZMV5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3CPQ6ZMV5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3CPQ6ZMV5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3CPQ6ZMV5 AC011551.1-201ENST00000614101 683 ntBASIC25.88■■□□□ 1.73
PPP4R3CPQ6ZMV5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R3CPQ6ZMV5 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.87■■□□□ 1.73
PPP4R3CPQ6ZMV5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.87■■□□□ 1.73
PPP4R3CPQ6ZMV5 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC25.87■■□□□ 1.73
PPP4R3CPQ6ZMV5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.87■■□□□ 1.73
PPP4R3CPQ6ZMV5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PPP4R3CPQ6ZMV5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.87■■□□□ 1.73
PPP4R3CPQ6ZMV5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 Z92544.1-202ENST00000571933 1220 ntBASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 AC093323.1-202ENST00000635031 2045 ntBASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R3CPQ6ZMV5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.85■■□□□ 1.73
PPP4R3CPQ6ZMV5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R3CPQ6ZMV5 AC040160.2-201ENST00000623816 1675 ntBASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PPP4R3CPQ6ZMV5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.83■■□□□ 1.72
PPP4R3CPQ6ZMV5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 MIR4281-201ENST00000580852 62 ntBASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 AC137630.3-201ENST00000607245 391 ntBASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R3CPQ6ZMV5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 GUSBP5-201ENST00000418136 578 ntBASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP4R3CPQ6ZMV5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 UPF3AP2-201ENST00000457924 1132 ntBASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 AC022762.2-201ENST00000600308 1353 ntBASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R3CPQ6ZMV5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 AC239859.2-201ENST00000444165 318 ntBASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.79■■□□□ 1.72
PPP4R3CPQ6ZMV5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms