Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.7■■□□□ 1.55
DCLRE1AQ6PJP8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DCLRE1AQ6PJP8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.7■■□□□ 1.54
DCLRE1AQ6PJP8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.7■■□□□ 1.54
DCLRE1AQ6PJP8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.7■■□□□ 1.54
DCLRE1AQ6PJP8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
DCLRE1AQ6PJP8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
DCLRE1AQ6PJP8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DCLRE1AQ6PJP8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DCLRE1AQ6PJP8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DCLRE1AQ6PJP8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DCLRE1AQ6PJP8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DCLRE1AQ6PJP8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DCLRE1AQ6PJP8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
DCLRE1AQ6PJP8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.68■■□□□ 1.54
DCLRE1AQ6PJP8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.68■■□□□ 1.54
DCLRE1AQ6PJP8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.68■■□□□ 1.54
DCLRE1AQ6PJP8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
DCLRE1AQ6PJP8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.68■■□□□ 1.54
DCLRE1AQ6PJP8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 AC096631.2-201ENST00000436136 790 ntBASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 AC110285.6-201ENST00000617652 491 ntBASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.67■■□□□ 1.54
DCLRE1AQ6PJP8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.66■■□□□ 1.54
DCLRE1AQ6PJP8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DCLRE1AQ6PJP8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.65■■□□□ 1.54
DCLRE1AQ6PJP8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DCLRE1AQ6PJP8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
DCLRE1AQ6PJP8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
DCLRE1AQ6PJP8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.64■■□□□ 1.54
DCLRE1AQ6PJP8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DCLRE1AQ6PJP8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
DCLRE1AQ6PJP8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.64■■□□□ 1.53
DCLRE1AQ6PJP8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.63■■□□□ 1.53
DCLRE1AQ6PJP8 HLA-L-211ENST00000482052 1765 ntBASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 SRD5A1P1-201ENST00000442297 786 ntBASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DCLRE1AQ6PJP8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 AL161729.1-201ENST00000604104 1402 ntBASIC24.61■■□□□ 1.53
DCLRE1AQ6PJP8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.6■■□□□ 1.53
DCLRE1AQ6PJP8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 AC022211.4-201ENST00000625094 2161 ntBASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 AC005837.3-201ENST00000612163 286 ntBASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DCLRE1AQ6PJP8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
DCLRE1AQ6PJP8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
DCLRE1AQ6PJP8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DCLRE1AQ6PJP8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
DCLRE1AQ6PJP8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms