Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
BRAT1Q6PJG6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.11■■□□□ 1.29
BRAT1Q6PJG6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRAT1Q6PJG6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
BRAT1Q6PJG6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.09■■□□□ 1.29
BRAT1Q6PJG6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
BRAT1Q6PJG6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.09■■□□□ 1.29
BRAT1Q6PJG6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
BRAT1Q6PJG6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 AL117332.1-201ENST00000622628 974 ntBASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRAT1Q6PJG6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRAT1Q6PJG6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BRAT1Q6PJG6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRAT1Q6PJG6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRAT1Q6PJG6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRAT1Q6PJG6 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 MIR3621-201ENST00000580529 85 ntBASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 AL356740.2-201ENST00000601559 647 ntBASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 AC005703.6-201ENST00000623265 1329 ntBASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BRAT1Q6PJG6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BRAT1Q6PJG6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BRAT1Q6PJG6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BRAT1Q6PJG6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BRAT1Q6PJG6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BRAT1Q6PJG6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.02■■□□□ 1.28
BRAT1Q6PJG6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BRAT1Q6PJG6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.02■■□□□ 1.28
BRAT1Q6PJG6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.02■■□□□ 1.28
BRAT1Q6PJG6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.01■■□□□ 1.27
BRAT1Q6PJG6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.01■■□□□ 1.27
BRAT1Q6PJG6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BRAT1Q6PJG6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms