Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC136469.2-201ENST00000623944 1028 ntBASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS13DQ5THJ4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 AC022517.1-201ENST00000592429 346 ntBASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 AC097639.1-201ENST00000565519 1891 ntBASIC15.72■□□□□ 0.11
VPS13DQ5THJ4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.71■□□□□ 0.11
VPS13DQ5THJ4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS13DQ5THJ4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.71■□□□□ 0.1
VPS13DQ5THJ4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.71■□□□□ 0.1
VPS13DQ5THJ4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.71■□□□□ 0.1
VPS13DQ5THJ4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 DUX4L19-201ENST00000557448 1267 ntBASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 AC099791.2-201ENST00000605725 427 ntBASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13DQ5THJ4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13DQ5THJ4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13DQ5THJ4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13DQ5THJ4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13DQ5THJ4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS13DQ5THJ4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13DQ5THJ4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 AC233992.3-201ENST00000607491 485 ntBASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13DQ5THJ4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 AC011298.3-201ENST00000615796 283 ntBASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13DQ5THJ4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 IKBKGP1-201ENST00000612193 1073 ntBASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 SLC6A10P-202ENST00000431994 2058 ntBASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13DQ5THJ4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13DQ5THJ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms