Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00242Q5T6M2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00242Q5T6M2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00242Q5T6M2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 AC092068.2-201ENST00000590491 1708 ntBASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 EP400NL-214ENST00000641289 2402 ntBASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 DUSP8P3-201ENST00000399571 1760 ntBASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00242Q5T6M2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
LINC00242Q5T6M2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 AC007029.1-201ENST00000604183 313 ntBASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00242Q5T6M2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 RAP2CP1-202ENST00000605179 643 ntBASIC15.64■□□□□ 0.09
LINC00242Q5T6M2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms