Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE4Q2TBC4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE4Q2TBC4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 Z92544.1-202ENST00000571933 1220 ntBASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.46■■□□□ 1.03
PRICKLE4Q2TBC4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.45■■□□□ 1.03
PRICKLE4Q2TBC4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PRICKLE4Q2TBC4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE4Q2TBC4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE4Q2TBC4 AC004448.1-201ENST00000458332 883 ntBASIC21.45■■□□□ 1.02
PRICKLE4Q2TBC4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE4Q2TBC4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE4Q2TBC4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 ABCB10P4-201ENST00000566803 2184 ntBASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE4Q2TBC4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 SNX5-217ENST00000606557 1087 ntBASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.43■■□□□ 1.02
PRICKLE4Q2TBC4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 AC239859.2-201ENST00000444165 318 ntBASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE4Q2TBC4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 KRT125P-201ENST00000546827 989 ntBASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE4Q2TBC4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 AL035685.1-201ENST00000636663 812 ntBASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE4Q2TBC4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRICKLE4Q2TBC4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PRICKLE4Q2TBC4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRICKLE4Q2TBC4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PRICKLE4Q2TBC4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms