Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 AC141586.4-201ENST00000624558 1573 ntBASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 BX664725.1-201ENST00000438252 379 ntBASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RASGEF1BQ0VAM2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RASGEF1BQ0VAM2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
RASGEF1BQ0VAM2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RASGEF1BQ0VAM2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RASGEF1BQ0VAM2 AC137630.3-201ENST00000607245 391 ntBASIC20.77■□□□□ 0.92
RASGEF1BQ0VAM2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RASGEF1BQ0VAM2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RASGEF1BQ0VAM2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 Z92544.1-202ENST00000571933 1220 ntBASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RASGEF1BQ0VAM2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 AC239859.2-201ENST00000444165 318 ntBASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 KRT125P-201ENST00000546827 989 ntBASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RASGEF1BQ0VAM2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RASGEF1BQ0VAM2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RASGEF1BQ0VAM2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.71■□□□□ 0.91
RASGEF1BQ0VAM2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.71■□□□□ 0.91
RASGEF1BQ0VAM2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.71■□□□□ 0.91
RASGEF1BQ0VAM2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RASGEF1BQ0VAM2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RASGEF1BQ0VAM2 AF131216.4-201ENST00000638924 1588 ntBASIC20.71■□□□□ 0.91
RASGEF1BQ0VAM2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.7■□□□□ 0.91
RASGEF1BQ0VAM2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RASGEF1BQ0VAM2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RASGEF1BQ0VAM2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RASGEF1BQ0VAM2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms